FastQC Report![[OK]](Icons/tick.png)
Basic Statistics
| Measure | Value |
|---|---|
| Filename | 60.fq |
| File type | Conventional base calls |
| Encoding | Illumina 1.5 |
| Total Sequences | 27385117 |
| Filtered Sequences | 0 |
| Sequence length | 49 |
| %GC | 51 |
Per base sequence quality
Per sequence quality scores
![[FAIL]](Icons/error.png)
Per base sequence content
Per base GC content
![[WARN]](Icons/warning.png)
Per sequence GC content
Per base N content
Sequence Length Distribution
Sequence Duplication Levels
Overrepresented sequences
| Sequence | Count | Percentage | Possible Source |
|---|---|---|---|
| AAGCTGCCAGTTGAAGAACTGTTGGAATTCTCGGGTGCCAAGGAACTCC | 2222314 | 8.115042926418756 | RNA PCR Primer, Index 1 (100% over 27bp) |
| TAGCTTATCAGACTGATGTTGATGGAATTCTCGGGTGCCAAGGAACTCC | 1542631 | 5.63309990605481 | RNA PCR Primer, Index 1 (100% over 27bp) |
| TAGCTTATCAGACTGATGTTGACTGGAATTCTCGGGTGCCAAGGAACTC | 1231577 | 4.497249363586798 | RNA PCR Primer, Index 1 (100% over 26bp) |
| TGAGGTAGTAGATTGTATAGTTTGGAATTCTCGGGTGCCAAGGAACTCC | 905907 | 3.3080267650490596 | RNA PCR Primer, Index 1 (100% over 27bp) |
| TAGCTTATCAGACTGATGTTGACTTGGAATTCTCGGGTGCCAAGGAACT | 830991 | 3.0344621131251697 | RNA PCR Primer, Index 1 (100% over 25bp) |
| TTCACAGTGGCTAAGTTCCGTGGAATTCTCGGGTGCCAAGGAACTCCAG | 541214 | 1.9763070575889816 | RNA PCR Primer, Index 1 (100% over 29bp) |
| TTCAAGTAATCCAGGATAGGCTTGGAATTCTCGGGTGCCAAGGAACTCC | 486943 | 1.7781300697017288 | RNA PCR Primer, Index 1 (100% over 27bp) |
| TAGCTTATCAGACTGATGTTGTGGAATTCTCGGGTGCCAAGGAACTCCA | 227802 | 0.8318459986860747 | RNA PCR Primer, Index 1 (100% over 28bp) |
| CAACGGAATCCCAAAAGCAGCTGTGGAATTCTCGGGTGCCAAGGAACTC | 212792 | 0.7770352049253615 | RNA PCR Primer, Index 1 (100% over 26bp) |
| TGAGGTAGTAGATTGTATAGTTGGAATTCTCGGGTGCCAAGGAACTCCA | 207979 | 0.7594599650605838 | RNA PCR Primer, Index 1 (100% over 28bp) |
| TAGCTTATCAGACTGATGTTGACATGGAATTCTCGGGTGCCAAGGAACT | 198793 | 0.725916197473248 | RNA PCR Primer, Index 1 (100% over 25bp) |
| CAAAGAATTCTCCTTTTGGGCTTGGAATTCTCGGGTGCCAAGGAACTCC | 183962 | 0.6717590434249376 | RNA PCR Primer, Index 1 (100% over 27bp) |
| CCCATAAAGTAGAAAGCACTTGGAATTCTCGGGTGCCAAGGAACTCCAG | 168258 | 0.6144140264217238 | RNA PCR Primer, Index 1 (100% over 29bp) |
| TGAGGTAGTAGTTTGTGCTGTTTGGAATTCTCGGGTGCCAAGGAACTCC | 152024 | 0.5551336516108366 | RNA PCR Primer, Index 1 (100% over 27bp) |
| AAGCTGCCAGTTGAAGAACTGTGGAATTCTCGGGTGCCAAGGAACTCCA | 151306 | 0.5525117895242149 | RNA PCR Primer, Index 1 (100% over 28bp) |
| ACTGGACTTGGAGTCAGAAGGCTGGAATTCTCGGGTGCCAAGGAACTCC | 150238 | 0.5486118609608277 | RNA PCR Primer, Index 1 (100% over 27bp) |
| CATAAAGTAGAAAGCACTACTTGGAATTCTCGGGTGCCAAGGAACTCCA | 128505 | 0.46925123599070256 | RNA PCR Primer, Index 1 (100% over 28bp) |
| TATTGCACTTGTCCCGGCCTGTTGGAATTCTCGGGTGCCAAGGAACTCC | 122064 | 0.44573116119971296 | RNA PCR Primer, Index 1 (100% over 27bp) |
| TTCACAGTGGCTAAGTTCTGTGGAATTCTCGGGTGCCAAGGAACTCCAG | 113929 | 0.4160252446611785 | RNA PCR Primer, Index 1 (100% over 29bp) |
| CACCACGTTCCCGTGGTGGAATTCTCGGGTGCCAAGGAACTCCAGTCAC | 109854 | 0.4011448992531235 | RNA PCR Primer, Index 1 (100% over 33bp) |
| TGAGGTAGTAGGTTGTATAGTTTGGAATTCTCGGGTGCCAAGGAACTCC | 106395 | 0.38851395084417567 | RNA PCR Primer, Index 1 (100% over 27bp) |
| AGCTACATCTGGCTACTGGGTCTCTGGAATTCTCGGGTGCCAAGGAACT | 92315 | 0.3370991622931536 | RNA PCR Primer, Index 1 (100% over 25bp) |
| ATTCCACCACGTTCCCGTGGTGGAATTCTCGGGTGCCAAGGAACTCCAG | 90366 | 0.3299821578268225 | RNA PCR Primer, Index 1 (100% over 29bp) |
| AACATTCAACGCTGTCGGTGAGTTGGAATTCTCGGGTGCCAAGGAACTC | 89662 | 0.3274114183992714 | RNA PCR Primer, Index 1 (100% over 26bp) |
| TAGCTTATCAGACTGATGTTGACCTGGAATTCTCGGGTGCCAAGGAACT | 85469 | 0.31210018200762113 | RNA PCR Primer, Index 1 (100% over 25bp) |
| CCACGTTCCCGTGGTGGAATTCTCGGGTGCCAAGGAACTCCAGTCACTG | 85134 | 0.31087688980843137 | RNA PCR Primer, Index 2 (97% over 35bp) |
| TGTAAACATCCCCGACTGGAAGCTTGGAATTCTCGGGTGCCAAGGAACT | 83224 | 0.30390229846379696 | RNA PCR Primer, Index 1 (100% over 25bp) |
| TTGAGAACTGAATTCCATAGGTTTGGAATTCTCGGGTGCCAAGGAACTC | 82091 | 0.2997650146975819 | RNA PCR Primer, Index 1 (100% over 26bp) |
| ACTGGACTTGGAGTCAGAAGGTGGAATTCTCGGGTGCCAAGGAACTCCA | 81451 | 0.2974279788543536 | RNA PCR Primer, Index 1 (100% over 28bp) |
| ACTGGACTTGGAGTCAGAAGGCATGGAATTCTCGGGTGCCAAGGAACTC | 71524 | 0.26117836195478006 | RNA PCR Primer, Index 1 (100% over 26bp) |
| TTCAAGTAATTCAGGATAGGTTTGGAATTCTCGGGTGCCAAGGAACTCC | 69314 | 0.2531082850586324 | RNA PCR Primer, Index 1 (100% over 27bp) |
| TGAGGTAGTAGATTGTATAGTTATGGAATTCTCGGGTGCCAAGGAACTC | 68955 | 0.25179735401532155 | RNA PCR Primer, Index 1 (100% over 26bp) |
| CACGTTCCCGTGGTGGAATTCTCGGGTGCCAAGGAACTCCAGTCACTGA | 66362 | 0.24232870723174196 | RNA PCR Primer, Index 2 (97% over 36bp) |
| TTCACAGTGGCTAAGTTCCTGGAATTCTCGGGTGCCAAGGAACTCCAGT | 62552 | 0.22841604072752364 | RNA PCR Primer, Index 1 (100% over 30bp) |
| CAACAGCAGTCGATGGGCTGTTGGAATTCTCGGGTGCCAAGGAACTCCA | 60843 | 0.22217542470240312 | RNA PCR Primer, Index 1 (100% over 28bp) |
| TGTAAACATCCTTGACTGGAAGCTTGGAATTCTCGGGTGCCAAGGAACT | 57198 | 0.2088652752515171 | RNA PCR Primer, Index 1 (100% over 25bp) |
| TAGCAGCACGTAAATATTGGCGTGGAATTCTCGGGTGCCAAGGAACTCC | 51657 | 0.1886316571150673 | RNA PCR Primer, Index 1 (100% over 27bp) |
| ACTGGACTTGGAGTCAGAAGGCTTGGAATTCTCGGGTGCCAAGGAACTC | 51547 | 0.18822997907951244 | RNA PCR Primer, Index 1 (100% over 26bp) |
| CAAAGAATTCTCCTTTTGGGCTTTGGAATTCTCGGGTGCCAAGGAACTC | 51352 | 0.1875179134710288 | RNA PCR Primer, Index 1 (100% over 26bp) |
| ATCACATTGCCAGGGATTTTGGAATTCTCGGGTGCCAAGGAACTCCAGT | 49585 | 0.18106550357261575 | RNA PCR Primer, Index 1 (100% over 30bp) |
| TGAGGTAGTAGGTTGTATAGTTGGAATTCTCGGGTGCCAAGGAACTCCA | 48762 | 0.1780602215429644 | RNA PCR Primer, Index 1 (100% over 28bp) |
| CATTGCACTTGTCTCGGTCTGATGGAATTCTCGGGTGCCAAGGAACTCC | 47590 | 0.1737805246550526 | RNA PCR Primer, Index 1 (100% over 27bp) |
| TATTGCACTTGTCCCGGCCTGTAATGGAATTCTCGGGTGCCAAGGAACT | 46837 | 0.17103085592075434 | RNA PCR Primer, Index 1 (100% over 25bp) |
| AACATTCAACGCTGTCGGTGAGTGGAATTCTCGGGTGCCAAGGAACTCC | 45876 | 0.16752165053740686 | RNA PCR Primer, Index 1 (100% over 27bp) |
| TTCACAGTGGCTAAGTTCTGGAATTCTCGGGTGCCAAGGAACTCCAGTC | 45625 | 0.16660509429264078 | RNA PCR Primer, Index 1 (100% over 31bp) |
| AGAGGTAAAAAATTGATTTGACTTGGAATTCTCGGGTGCCAAGGAACTC | 43418 | 0.15854597225200825 | RNA PCR Primer, Index 1 (100% over 26bp) |
| TGAGGTAGTAGATTGTATAGTTTTGGAATTCTCGGGTGCCAAGGAACTC | 41006 | 0.1497382684178417 | RNA PCR Primer, Index 1 (100% over 26bp) |
| ACCACGTTCCCGTGGTGGAATTCTCGGGTGCCAAGGAACTCCAGTCACT | 39637 | 0.14473920268443624 | RNA PCR Primer, Index 3 (100% over 34bp) |
| AGCTACATCTGGCTACTGGGTCTTGGAATTCTCGGGTGCCAAGGAACTC | 39380 | 0.14380073672863986 | RNA PCR Primer, Index 1 (100% over 26bp) |
| TTCAAGTAATCCAGGATAGGCTGGAATTCTCGGGTGCCAAGGAACTCCA | 37536 | 0.1370671522053384 | RNA PCR Primer, Index 1 (100% over 28bp) |
| TGAGGTAGTAGTTTGTGCTGTTATGGAATTCTCGGGTGCCAAGGAACTC | 35713 | 0.13041025167064285 | RNA PCR Primer, Index 1 (100% over 26bp) |
| TCCACCACGTTCCCGTGGTGGAATTCTCGGGTGCCAAGGAACTCCAGTC | 34988 | 0.12776282825448582 | RNA PCR Primer, Index 1 (100% over 31bp) |
| AGCAGCATTGTACAGGGCTATGATGGAATTCTCGGGTGCCAAGGAACTC | 34316 | 0.12530894061909612 | RNA PCR Primer, Index 1 (100% over 26bp) |
| TATTGCACTTGTCCCGGCCTGTATGGAATTCTCGGGTGCCAAGGAACTC | 33815 | 0.123479479748069 | RNA PCR Primer, Index 1 (100% over 26bp) |
| TACCCATTGCATATCGGAGCTGTGGAATTCTCGGGTGCCAAGGAACTCC | 31405 | 0.11467907915091251 | RNA PCR Primer, Index 1 (100% over 27bp) |
| GCCCCCGTAGCTCAGGGGATAGAGCGTCTGCCTTGGAATTCTCGGGTGC | 31399 | 0.11465716943988226 | No Hit |
| AGAGGTAGTAGGTTGCATAGTTTGGAATTCTCGGGTGCCAAGGAACTCC | 31355 | 0.11449649822566031 | RNA PCR Primer, Index 1 (100% over 27bp) |
| TCAGTGCACTACAGAACTTTGTTGGAATTCTCGGGTGCCAAGGAACTCC | 31184 | 0.11387207146129774 | RNA PCR Primer, Index 1 (100% over 27bp) |
| TGAGGTAGTAGTTTGTACAGTTTGGAATTCTCGGGTGCCAAGGAACTCC | 29572 | 0.10798566243116654 | RNA PCR Primer, Index 1 (100% over 27bp) |
| CCCATAAAGTAGAAAGCACTACTGGAATTCTCGGGTGCCAAGGAACTCC | 29452 | 0.10754746821056123 | RNA PCR Primer, Index 1 (100% over 27bp) |
| AGAGGTAAAAAATTGATTTGACTGGAATTCTCGGGTGCCAAGGAACTCC | 28528 | 0.10417337271190041 | RNA PCR Primer, Index 1 (100% over 27bp) |
| ACTAGACCTAGCCCAAAGATATGGAATTCTCGGGTGCCAAGGAACTCCA | 28281 | 0.1032714229411545 | RNA PCR Primer, Index 1 (100% over 28bp) |
| AAGCTGCCAGTTGAAGAACTTGGAATTCTCGGGTGCCAAGGAACTCCAG | 28117 | 0.10267255750632724 | RNA PCR Primer, Index 1 (100% over 29bp) |
| TTCACAGTGGCTAAGTTCTGCTGGAATTCTCGGGTGCCAAGGAACTCCA | 28008 | 0.10227453108927745 | RNA PCR Primer, Index 1 (100% over 28bp) |
| AGCTCGGTCTGAGGCCCCTCAGTTGGAATTCTCGGGTGCCAAGGAACTC | 27583 | 0.10072259322463366 | RNA PCR Primer, Index 1 (100% over 26bp) |
| TAGCTTATCAGACTGATGTTTGGAATTCTCGGGTGCCAAGGAACTCCAG | 27537 | 0.10055461877340162 | RNA PCR Primer, Index 1 (100% over 29bp) |
Kmer Content
| Sequence | Count | Obs/Exp Overall | Obs/Exp Max | Max Obs/Exp Position |
|---|---|---|---|---|
| TTCTC | 27564310 | 28.370937 | 367.05243 | 28 |
| AATTC | 27836710 | 27.722897 | 358.75708 | 26 |
| ATTCT | 27580960 | 26.949741 | 348.82434 | 27 |
| TGCCA | 28771685 | 26.354956 | 326.78384 | 36 |
| TCTCG | 27385490 | 24.611725 | 320.36594 | 29 |
| GCCAA | 25901545 | 24.182327 | 333.55072 | 37 |
| AACTC | 22590145 | 24.154411 | 379.8572 | 44 |
| CCAAG | 25839405 | 24.124313 | 333.6289 | 38 |
| GAACT | 27731210 | 24.114847 | 309.03473 | 43 |
| GAATT | 27915105 | 22.609879 | 292.22238 | 25 |
| ACTCC | 19206495 | 21.632507 | 399.94592 | 45 |
| CTCGG | 27371895 | 21.479364 | 279.53592 | 30 |
| GTGCC | 26452990 | 20.75828 | 280.9885 | 35 |
| GGAAT | 27826345 | 19.67932 | 255.08563 | 24 |
| CAAGG | 25670145 | 19.49122 | 271.36526 | 39 |
| TGGAA | 27529825 | 19.46962 | 252.57701 | 23 |
| GGAAC | 25036010 | 19.009724 | 270.08475 | 42 |
| AAGGA | 25530435 | 18.402958 | 257.62503 | 40 |
| AGGAA | 25287160 | 18.2276 | 256.7741 | 41 |
| TCGGG | 27229825 | 17.377995 | 227.34157 | 31 |
| CGGGT | 27139170 | 17.320139 | 228.7624 | 32 |
| GGTGC | 26962340 | 17.207287 | 228.7247 | 34 |
| GGGTG | 27141615 | 14.087332 | 186.08636 | 33 |
| CTCCA | 11346905 | 12.780157 | 108.88306 | 45 |
| CCAGT | 10032735 | 9.190019 | 108.06232 | 7 |
| TCCAG | 9844230 | 9.017346 | 75.0209 | 45 |
| TTGGA | 12142605 | 8.425397 | 158.28062 | 22 |
| ACTGA | 7303810 | 6.3513374 | 179.52484 | 12 |
| CAGTC | 6715925 | 6.151809 | 38.417408 | 43 |
| AGTCA | 6089055 | 5.2949953 | 36.454525 | 44 |
| TGTTG | 7661780 | 5.2159424 | 138.90646 | 17 |
| GACTG | 6845580 | 5.099711 | 154.32457 | 11 |
| GTTGA | 7190745 | 4.989447 | 133.78444 | 18 |
| TGATG | 6864980 | 4.763408 | 142.6663 | 14 |
| TATCA | 4716665 | 4.69738 | 204.76915 | 6 |
| TCAGA | 5358715 | 4.6598973 | 180.88966 | 8 |
| TTATC | 4764325 | 4.655289 | 201.01158 | 5 |
| CTTAT | 4656510 | 4.5499415 | 200.83562 | 4 |
| CAGAC | 4812790 | 4.493341 | 192.73264 | 9 |
| CTGGA | 5968180 | 4.446079 | 48.608826 | 23 |
| GTCAC | 4780595 | 4.3790402 | 38.414925 | 45 |
| CTGAT | 5116040 | 4.3648987 | 175.57564 | 13 |
| AGACT | 4934895 | 4.291347 | 179.77306 | 10 |
| AGCTT | 5008845 | 4.2734427 | 174.83934 | 2 |
| ATCAG | 4811920 | 4.1844087 | 179.34152 | 7 |
| TAGCT | 4862745 | 4.1487927 | 174.89458 | 1 |
| TCACT | 3943415 | 4.1368947 | 41.54083 | 45 |
| GCTTA | 4677455 | 3.9907067 | 175.38654 | 3 |
| ATGGA | 5457235 | 3.859461 | 66.395615 | 22 |
| ATGTT | 4747760 | 3.7728734 | 163.10507 | 16 |
| CTTGG | 4915155 | 3.5925024 | 37.297836 | 23 |
| GTGGA | 5778210 | 3.5007963 | 28.818182 | 20 |
| GATGT | 4910275 | 3.4070957 | 142.63654 | 15 |
| CACTG | 3259770 | 2.98596 | 30.470562 | 45 |
| AGAAC | 3235635 | 2.8678122 | 104.62837 | 15 |
| AACTG | 3204500 | 2.7866087 | 101.43619 | 17 |
| CTGCC | 2856895 | 2.7565925 | 113.6858 | 4 |
| CTGTT | 3259875 | 2.7287626 | 96.186844 | 19 |
| AAGAA | 3214565 | 2.704781 | 99.51624 | 14 |
| TTGAC | 3145560 | 2.6837265 | 98.136856 | 19 |
| AAGCT | 3026355 | 2.631695 | 102.4317 | 1 |
| ACTGT | 3030575 | 2.5856237 | 99.22391 | 18 |
| CAGTT | 2915520 | 2.487461 | 100.88963 | 8 |
| ACTTG | 2892820 | 2.468094 | 35.248543 | 22 |
| TGACT | 2877435 | 2.4549677 | 85.839165 | 20 |
| GTTGG | 4126210 | 2.4527283 | 69.772446 | 21 |
| AGCTG | 3282145 | 2.4450798 | 87.442314 | 2 |
| TTGAA | 2987520 | 2.4197462 | 96.13865 | 11 |
| AGTTG | 3466250 | 2.4051292 | 82.00231 | 9 |
| GCCAG | 2999015 | 2.3986704 | 94.49952 | 6 |
| ACTGG | 3100945 | 2.3100924 | 45.011364 | 22 |
| TTTGG | 3368030 | 2.292868 | 47.328064 | 21 |
| GCTGC | 2747685 | 2.1561723 | 92.27006 | 3 |
| TGAAG | 2932620 | 2.074005 | 83.80688 | 12 |
| GAAGA | 2837355 | 2.0452344 | 85.06208 | 13 |
| GTAGT | 2745650 | 1.905126 | 60.966064 | 5 |
| AGTAG | 2664825 | 1.8846152 | 62.00572 | 7 |
| CTGAC | 1921255 | 1.7598758 | 15.436538 | 45 |
| TAGTA | 2145385 | 1.7376577 | 71.01718 | 6 |
| GATGG | 2796580 | 1.6943408 | 49.517803 | 21 |
| TAGTT | 2080380 | 1.6532029 | 57.839054 | 18 |
| GTTTG | 2410570 | 1.6410539 | 44.564125 | 20 |
| GACTT | 1899330 | 1.620469 | 34.969128 | 21 |
| GTAGA | 2268360 | 1.6042275 | 44.417507 | 8 |
| CGTGG | 2491285 | 1.5899309 | 18.174797 | 19 |
| TTGAT | 1952035 | 1.551212 | 59.630898 | 19 |
| AGGTA | 2189000 | 1.5481026 | 64.29441 | 3 |
| TTGTA | 1937225 | 1.5394429 | 59.307392 | 13 |
| TCACA | 1360380 | 1.4545802 | 55.618988 | 2 |
| TGTAT | 1818710 | 1.4452634 | 57.29996 | 14 |
| ATAGT | 1783075 | 1.4442041 | 59.41366 | 17 |
| ATTGT | 1785355 | 1.4187571 | 49.607796 | 12 |
| GGTAG | 2319710 | 1.4054234 | 53.13929 | 4 |
| GATTG | 2013415 | 1.3970495 | 43.904434 | 11 |
| TGACC | 1518040 | 1.3905295 | 11.200548 | 45 |
| CCGTG | 1770470 | 1.3893292 | 21.491653 | 18 |
| AGTTT | 1747040 | 1.3883096 | 43.723515 | 19 |
| GCTTG | 1891935 | 1.3828211 | 27.423756 | 20 |
| AGATT | 1705080 | 1.381032 | 50.365353 | 10 |
| TGAGG | 2274885 | 1.3782659 | 51.812416 | 1 |
| GTATA | 1693065 | 1.3713003 | 57.5229 | 15 |
| TATAG | 1690425 | 1.3691621 | 57.28858 | 16 |
| GAGGT | 2241750 | 1.3581907 | 54.88237 | 2 |
| TGTGG | 2245245 | 1.334633 | 13.229098 | 20 |
| TAGAT | 1628440 | 1.3189573 | 50.244553 | 9 |
| AGTGG | 2151440 | 1.3034753 | 28.420313 | 6 |
| GTTCC | 1431445 | 1.2864598 | 29.361872 | 15 |
| AATCC | 1149025 | 1.2285898 | 31.422266 | 8 |
| ACAGT | 1401475 | 1.2187119 | 40.133854 | 4 |
| CCTGG | 1548515 | 1.2151558 | 5.0074944 | 17 |
| TCCCG | 1221395 | 1.1785132 | 16.038187 | 12 |
| GGCTT | 1601085 | 1.1702379 | 28.000942 | 19 |
| CACAG | 1246125 | 1.1634134 | 44.194527 | 3 |
| TGGCT | 1589400 | 1.1616975 | 34.317272 | 8 |
| TTCAC | 1082230 | 1.1353287 | 47.861835 | 1 |
| GCACT | 1236340 | 1.1324914 | 18.609962 | 5 |
| GGCTA | 1497290 | 1.115427 | 34.426266 | 9 |
| CATGG | 1492445 | 1.1118178 | 8.14281 | 23 |
| AAGTA | 1336075 | 1.1029739 | 28.443733 | 4 |
| CAGTG | 1476385 | 1.0998538 | 34.582138 | 5 |
| AGGCT | 1450840 | 1.0808235 | 22.727177 | 18 |
| GCTGT | 1470015 | 1.0744385 | 10.958048 | 17 |
| GCTAA | 1212415 | 1.0543067 | 41.335445 | 10 |
| CTGTG | 1440705 | 1.0530158 | 8.449662 | 21 |
| CTAAG | 1196775 | 1.0407064 | 40.377304 | 11 |
| TTCAA | 1028520 | 1.0243148 | 33.960064 | 1 |
| GACCA | 1094365 | 1.0217265 | 9.279442 | 45 |
| CCAGG | 1266605 | 1.0130554 | 23.960125 | 11 |
| AGTTC | 1162515 | 0.99183357 | 37.408302 | 14 |
| AAGTT | 1207820 | 0.97827554 | 36.493687 | 13 |
| TAAGT | 1191250 | 0.9648546 | 37.565758 | 12 |
| CAGGA | 1267645 | 0.9625169 | 26.571386 | 12 |
| CCCGT | 980585 | 0.9461577 | 5.772653 | 10 |
| TCTGG | 1266815 | 0.92591906 | 7.290258 | 8 |
| ACCAA | 825335 | 0.89946276 | 8.597502 | 45 |
| GCTGG | 1403305 | 0.8955852 | 5.3985634 | 21 |
| TTCCC | 791975 | 0.8751747 | 6.432468 | 8 |
| GCCTG | 1107865 | 0.8693674 | 12.503377 | 17 |
| CAAGT | 998045 | 0.8678922 | 29.901289 | 3 |
| CACTT | 812595 | 0.8524642 | 20.735056 | 6 |
| CCTGT | 917335 | 0.8244219 | 14.202989 | 18 |
| AAGCA | 922100 | 0.81727684 | 11.589945 | 14 |
| AAAGC | 916630 | 0.81242853 | 11.564024 | 13 |
| AGGAT | 1144515 | 0.8094228 | 24.35556 | 13 |
| GTAAT | 987450 | 0.7997865 | 27.890217 | 6 |
| TCCGT | 879005 | 0.78997415 | 24.606514 | 17 |
| GTGGC | 1236485 | 0.78912115 | 30.696882 | 7 |
| ATCCA | 737750 | 0.7888359 | 31.168745 | 9 |
| TTCCG | 856925 | 0.77013063 | 26.483912 | 16 |
| CACGT | 828400 | 0.75881714 | 5.453836 | 4 |
| ATAGG | 1072740 | 0.7586622 | 25.34864 | 16 |
| CGTTC | 840465 | 0.75533766 | 5.286972 | 6 |
| TAGGC | 1009945 | 0.7523726 | 22.223415 | 17 |
| TCAAG | 857415 | 0.74560153 | 29.632284 | 2 |
| ATTGC | 867045 | 0.7397447 | 18.09646 | 2 |
| TCCTT | 718550 | 0.73957723 | 14.376937 | 11 |
| GGACT | 991465 | 0.7386057 | 16.582537 | 4 |
| TAATC | 734915 | 0.7319102 | 29.106764 | 7 |
| AGTAA | 875010 | 0.7223496 | 28.289219 | 5 |
| TTCTG | 854675 | 0.7154278 | 9.811643 | 16 |
| ACCAC | 612690 | 0.70335567 | 7.892752 | 2 |
| TGCTG | 960395 | 0.70195574 | 8.277113 | 16 |
| CACCA | 607485 | 0.6973804 | 6.901688 | 1 |
| TTTTG | 894445 | 0.69736755 | 11.241304 | 14 |
| GGCTG | 1082005 | 0.69053245 | 5.1784606 | 20 |
| AGCAC | 739310 | 0.69023824 | 11.667505 | 15 |
| GGATA | 973155 | 0.68823373 | 24.210247 | 14 |
| CAGAA | 767985 | 0.6806814 | 18.959717 | 15 |
| CCACG | 691950 | 0.6805005 | 5.7297673 | 3 |
| GATAG | 956385 | 0.6763738 | 24.573046 | 15 |
| CTACT | 636240 | 0.66745645 | 9.750999 | 13 |
| CCAAT | 614120 | 0.6566451 | 6.6496396 | 44 |
| ATCCC | 571480 | 0.6436648 | 20.78879 | 8 |
| CCCAA | 554970 | 0.6370943 | 15.098275 | 10 |
| CTCCT | 574100 | 0.6344112 | 15.339631 | 10 |
| GACCT | 688385 | 0.6305629 | 5.133265 | 5 |
| TTGCA | 737790 | 0.62946707 | 18.030434 | 3 |
| TATGG | 899685 | 0.624265 | 7.8033357 | 22 |
| AAAGT | 753420 | 0.62197304 | 10.593923 | 6 |
| GGGCT | 970805 | 0.61956495 | 8.64644 | 18 |
| GGCCT | 779335 | 0.6115623 | 12.55969 | 16 |
| ACATC | 569215 | 0.6086306 | 14.082965 | 6 |
| AACAT | 590855 | 0.5997594 | 13.698881 | 5 |
| AGCAG | 788455 | 0.5986702 | 9.164709 | 16 |
| TTGTC | 712175 | 0.5961445 | 16.689856 | 9 |
| TAGAA | 715290 | 0.59049547 | 11.642617 | 10 |
| CTGTA | 688735 | 0.58761436 | 6.646085 | 19 |
| TTGTG | 863090 | 0.5875694 | 8.095064 | 19 |
| TGCAC | 634890 | 0.58156127 | 18.969387 | 4 |
| CATTG | 681620 | 0.58154404 | 7.9389772 | 5 |
| CCATA | 535810 | 0.57291245 | 13.757522 | 2 |
| AGCTC | 623165 | 0.57082117 | 6.618655 | 9 |
| ATCTG | 663335 | 0.5659436 | 8.392994 | 7 |
| CCCGG | 669020 | 0.56365377 | 13.316912 | 13 |
| CCGGC | 667485 | 0.56236047 | 13.351066 | 14 |
| CTTGT | 670005 | 0.560845 | 16.647488 | 8 |
| AGAAA | 662295 | 0.5572645 | 10.829335 | 11 |
| CAAAG | 625720 | 0.5545889 | 14.392235 | 1 |
| GTGCT | 758700 | 0.5545362 | 8.147382 | 15 |
| CTTTT | 578335 | 0.5544332 | 13.407722 | 13 |
| TCTCC | 500520 | 0.55310136 | 15.531043 | 9 |
| GCCCA | 550195 | 0.5410911 | 5.7274857 | 30 |
| CCAAA | 495035 | 0.5394967 | 13.022914 | 11 |
| AAAGA | 639650 | 0.5382106 | 11.772507 | 2 |
| CACTA | 502110 | 0.5368789 | 8.147255 | 15 |
| CGGAA | 704995 | 0.53529936 | 9.421774 | 4 |
| GTCAG | 717350 | 0.53439987 | 16.065275 | 13 |
| TGGAC | 715175 | 0.5327796 | 16.27746 | 3 |
| CATAA | 522745 | 0.53062296 | 12.739406 | 3 |
| CGGCC | 629195 | 0.5301009 | 13.369481 | 15 |
| TATTG | 665825 | 0.5291071 | 13.037575 | 1 |
| ATAAA | 548930 | 0.52897096 | 12.143455 | 4 |
| TTTGT | 677605 | 0.528305 | 11.470869 | 12 |
| CTGAA | 605230 | 0.52630335 | 5.4603367 | 8 |
| CCCAT | 467055 | 0.52604973 | 14.151722 | 1 |
| TCGGT | 713725 | 0.52166384 | 6.7140965 | 15 |
| ACATG | 598275 | 0.5202553 | 8.761679 | 22 |
| CCTTT | 503375 | 0.51810545 | 14.336417 | 12 |
| GAATC | 595325 | 0.51769006 | 10.778458 | 6 |
| GAAAG | 706405 | 0.5091939 | 9.375073 | 12 |
| ACATT | 511025 | 0.50893563 | 9.033654 | 2 |
| CAACG | 544815 | 0.50865287 | 11.364683 | 1 |
| GCAGC | 633065 | 0.5063377 | 9.480925 | 17 |
| GCTAC | 551355 | 0.5050429 | 10.077484 | 2 |
| GTCCC | 522720 | 0.5043679 | 15.626645 | 11 |
| CAATC | 470365 | 0.50293565 | 6.6364083 | 45 |
| TACTG | 587010 | 0.5008247 | 7.9785705 | 14 |
| ATTCC | 476890 | 0.5002881 | 6.728671 | 1 |
| AGGTT | 708420 | 0.49155185 | 8.836424 | 10 |
| CTACA | 456410 | 0.48801434 | 12.080707 | 3 |
| AATCT | 489570 | 0.48756835 | 5.4083986 | 45 |
| ACGGA | 637655 | 0.48416847 | 9.895204 | 3 |
| TAAAG | 581700 | 0.4802125 | 10.400426 | 5 |
| TCCCA | 422760 | 0.47615972 | 13.469426 | 9 |
| GTAAA | 571775 | 0.4720191 | 10.730326 | 2 |
| TGAAT | 581940 | 0.47134313 | 5.9892035 | 9 |
| GAGTC | 630380 | 0.46961036 | 16.147888 | 11 |
| GAAGG | 760265 | 0.4694766 | 12.564748 | 17 |
| TGACA | 535245 | 0.46544495 | 8.462564 | 20 |
| AGAAT | 561880 | 0.4638505 | 11.65607 | 4 |
| GTTGT | 680200 | 0.4630626 | 7.8287263 | 18 |
| AGAAG | 636195 | 0.45858482 | 15.29966 | 16 |
| CTGTC | 496315 | 0.44604528 | 8.694362 | 12 |
| AAACA | 427160 | 0.44193885 | 13.590798 | 4 |
| TGGGC | 691400 | 0.44124946 | 9.062937 | 17 |
| ACTAC | 411890 | 0.44041157 | 7.8795366 | 16 |
| TAGGT | 632955 | 0.4391889 | 8.525493 | 9 |
| TGTCC | 488605 | 0.43911618 | 13.8897505 | 10 |
| CTGGC | 546835 | 0.4291142 | 7.6835604 | 9 |
| TGGAG | 706125 | 0.42781413 | 13.247185 | 9 |
| GGTCT | 584970 | 0.42755637 | 6.554654 | 19 |
| CAGCT | 461280 | 0.422534 | 12.071244 | 18 |
| GTAGG | 697115 | 0.42235532 | 7.9491014 | 8 |
| CATCT | 400155 | 0.41978824 | 9.726689 | 6 |
| GTTCT | 501360 | 0.41967636 | 9.6124115 | 15 |
| CCACC | 347055 | 0.41967568 | 6.0414224 | 4 |
| GGAGT | 692285 | 0.419429 | 13.224833 | 10 |
| TGTAA | 516845 | 0.41861936 | 10.562307 | 1 |
| CCCAG | 422930 | 0.4159319 | 5.7250514 | 31 |
| TTCCA | 395825 | 0.41524577 | 5.8763275 | 2 |
| ATCAC | 387715 | 0.41456252 | 7.182863 | 1 |
| CGCTG | 527195 | 0.4137022 | 6.6441627 | 10 |
| CATCC | 367110 | 0.41348043 | 14.620488 | 7 |
| AAGGC | 544505 | 0.4134401 | 10.968813 | 18 |
| AAAAG | 488940 | 0.4114011 | 10.256195 | 13 |
| CAGCA | 436525 | 0.40755063 | 9.159687 | 4 |
| CAAAA | 390395 | 0.40390185 | 12.647958 | 12 |
| GGTTG | 674840 | 0.40114272 | 7.6829967 | 11 |
| TAAAC | 390520 | 0.39640528 | 13.313465 | 3 |
| CCCCG | 382445 | 0.39619046 | 6.7987366 | 10 |
| GACAT | 451775 | 0.39286008 | 8.543965 | 21 |
| ATTCA | 387675 | 0.38608992 | 9.012846 | 4 |
| GATTT | 484365 | 0.38490736 | 8.011479 | 15 |
| GCTCA | 413975 | 0.37920237 | 6.4913087 | 10 |
| ATCCT | 361260 | 0.37898487 | 7.2532454 | 8 |
| AGACC | 405615 | 0.3786923 | 5.4526596 | 4 |
| GTCGG | 587245 | 0.37477806 | 5.926227 | 14 |
| CTGGG | 583005 | 0.3720721 | 5.8729773 | 16 |
| CACAT | 344625 | 0.36848876 | 7.052553 | 3 |
| CCGAC | 371115 | 0.3649743 | 7.5099936 | 12 |
| TGTTT | 464745 | 0.36234546 | 6.9666896 | 19 |
| TGCCC | 375020 | 0.36185345 | 5.58011 | 29 |
| AACGC | 386900 | 0.36121947 | 7.913717 | 8 |
| CGACT | 393290 | 0.36025488 | 7.294328 | 13 |
| TCCCC | 297110 | 0.35249853 | 7.744435 | 9 |
| TCTGT | 419645 | 0.3512747 | 5.763003 | 17 |
| AACGG | 456140 | 0.34634498 | 9.808057 | 2 |
| TCAAC | 318110 | 0.3401377 | 9.019987 | 6 |
| CGGTG | 530600 | 0.33862737 | 5.9639993 | 16 |
| TTGGG | 559525 | 0.33259645 | 8.523595 | 16 |
| TACAT | 331875 | 0.3305181 | 10.968165 | 4 |
| TCCAT | 305780 | 0.32078278 | 5.9584565 | 14 |
| GTCTC | 354845 | 0.3189042 | 5.5599356 | 20 |
| TCTCT | 305685 | 0.3146304 | 5.882756 | 21 |
| CATTC | 296425 | 0.31096882 | 9.7224865 | 3 |
| GTTAT | 387750 | 0.30813095 | 5.458778 | 20 |
| GAAGC | 405205 | 0.30767027 | 6.680483 | 19 |
| TACTT | 314550 | 0.30735123 | 6.246391 | 18 |
| TTATG | 369840 | 0.29389852 | 5.535304 | 21 |
| GGAAG | 468540 | 0.2893314 | 5.9382744 | 18 |
| AGCTA | 330830 | 0.28768724 | 9.557858 | 1 |
| TGGGT | 483520 | 0.28741708 | 5.451191 | 17 |
| TGTGC | 387330 | 0.28310075 | 7.9459443 | 14 |
| TGAGT | 398860 | 0.27675724 | 5.48877 | 19 |
| TCCAC | 242355 | 0.27296734 | 5.3041143 | 3 |
| TAATT | 293645 | 0.27238715 | 5.026248 | 7 |
| ACGCT | 297095 | 0.27214 | 7.5259385 | 9 |
| CCCGA | 275610 | 0.27104956 | 6.5551496 | 11 |
| TGTCG | 366315 | 0.2677408 | 6.659049 | 13 |
| CCCCC | 206160 | 0.2626039 | 5.1111593 | 2 |
| CATAG | 301885 | 0.2625169 | 7.1148353 | 16 |
| AGCCC | 266040 | 0.26163793 | 5.449867 | 10 |
| CAACA | 213955 | 0.23317142 | 5.0252357 | 1 |
| GGGTC | 353450 | 0.22557077 | 5.760847 | 18 |
| TTGCC | 243510 | 0.21884586 | 5.9990187 | 7 |
| CCGTA | 233930 | 0.21428064 | 5.196124 | 5 |
| TAGCA | 230565 | 0.20049755 | 6.6553903 | 1 |
| ACCTA | 162420 | 0.17366686 | 5.472125 | 6 |